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High rates of virus-induced gene silencing by tobacco rattle virus in Populus.

Identifieur interne : 001D16 ( Main/Exploration ); précédent : 001D15; suivant : 001D17

High rates of virus-induced gene silencing by tobacco rattle virus in Populus.

Auteurs : Zedan Shen [République populaire de Chine] ; Jian Sun [République populaire de Chine] ; Jun Yao [République populaire de Chine] ; Shaojie Wang [République populaire de Chine] ; Mingquan Ding [République populaire de Chine] ; Huilong Zhang [République populaire de Chine] ; Zeyong Qian [République populaire de Chine] ; Nan Zhao [République populaire de Chine] ; Gang Sa [République populaire de Chine] ; Rui Zhao [République populaire de Chine] ; Xin Shen [République populaire de Chine] ; Andrea Polle [Allemagne] ; Shaoliang Chen [République populaire de Chine]

Source :

RBID : pubmed:26209619

Descripteurs français

English descriptors

Abstract

Virus-induced gene silencing (VIGS) has been shown to be an effective tool for investigating gene functions in herbaceous plant species, but has rarely been tested in trees. The establishment of a fast and reliable transformation system is especially important for woody plants, many of which are recalcitrant to transformation. In this study, we established a tobacco rattle virus (TRV)-based VIGS system for two Populus species, Populus euphratica and P. × canescens. Here, TRV constructs carrying a 266 bp or a 558 bp fragment of the phytoene desaturase (PDS) gene were Agrobacterium-infiltrated into leaves of the two poplar species. Agrobacterium-mediated delivery of the shorter insert, TRV2-PePDS266, into the host poplars resulted in expected photobleaching in both tree species, but not the longer insert, PePDS558. The efficiency of VIGS was temperature-dependent, increasing by raising the temperature from 18 to 28 °C. The optimized TRV-VIGS system at 28 °C resulted in a high silencing frequency and efficiency up to 65-73 and 83-94%, respectively, in the two tested poplars. Moreover, syringe inoculation of Agrobacterium in 100 mM acetosyringone induced a more efficient silencing in the two poplar species, compared with other agroinfiltration methods, e.g., direct injection, misting and agrodrench. There were plant species-related differences in the response to VIGS because the photobleaching symptoms were more severe in P. × canescens than in P. euphratica. Furthermore, VIGS-treated P. euphratica exhibited a higher recovery rate (50%) after several weeks of the virus infection, compared with TRV-infected P. × canescens plants (20%). Expression stability of reference genes was screened to assess the relative abundance of PePDS mRNA in VIGS-treated P. euphratica and P. × canescens. PeACT7 was stably expressed in P. euphratica and UBQ-L was selected as the most suitable reference gene for P. × canescens using three different statistical approaches, geNorm, NormFinder and BestKeeper. Quantitative real-time PCR showed significant reductions in PDS transcripts (55-64%) in the photobleached leaves of both VIGS-treated poplar species. Our results demonstrate that the TRV-based VIGS provides a practical tool for gene functional analysis in Populus sp., especially in those poplar species which are otherwise recalcitrant to transformation.

DOI: 10.1093/treephys/tpv064
PubMed: 26209619


Affiliations:


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Le document en format XML

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<term>Gene Expression Regulation, Plant (MeSH)</term>
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<term>Genes, Plant (MeSH)</term>
<term>Genetic Vectors (metabolism)</term>
<term>Oxidoreductases (genetics)</term>
<term>Phenotype (MeSH)</term>
<term>Photobleaching (MeSH)</term>
<term>Plant Diseases (virology)</term>
<term>Plant Viruses (physiology)</term>
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<term>Populus (virology)</term>
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<term>Gènes de plante (MeSH)</term>
<term>Maladies des plantes (virologie)</term>
<term>Normes de référence (MeSH)</term>
<term>Oxidoreductases (génétique)</term>
<term>Photoblanchiment (MeSH)</term>
<term>Phénotype (MeSH)</term>
<term>Populus (génétique)</term>
<term>Populus (virologie)</term>
<term>Régulation de l'expression des gènes végétaux (MeSH)</term>
<term>Vecteurs génétiques (métabolisme)</term>
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<term>ARN messager</term>
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<term>ARN messager</term>
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<term>Populus</term>
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<term>Gene Expression Regulation, Plant</term>
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<term>Normes de référence</term>
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<div type="abstract" xml:lang="en">Virus-induced gene silencing (VIGS) has been shown to be an effective tool for investigating gene functions in herbaceous plant species, but has rarely been tested in trees. The establishment of a fast and reliable transformation system is especially important for woody plants, many of which are recalcitrant to transformation. In this study, we established a tobacco rattle virus (TRV)-based VIGS system for two Populus species, Populus euphratica and P. × canescens. Here, TRV constructs carrying a 266 bp or a 558 bp fragment of the phytoene desaturase (PDS) gene were Agrobacterium-infiltrated into leaves of the two poplar species. Agrobacterium-mediated delivery of the shorter insert, TRV2-PePDS266, into the host poplars resulted in expected photobleaching in both tree species, but not the longer insert, PePDS558. The efficiency of VIGS was temperature-dependent, increasing by raising the temperature from 18 to 28 °C. The optimized TRV-VIGS system at 28 °C resulted in a high silencing frequency and efficiency up to 65-73 and 83-94%, respectively, in the two tested poplars. Moreover, syringe inoculation of Agrobacterium in 100 mM acetosyringone induced a more efficient silencing in the two poplar species, compared with other agroinfiltration methods, e.g., direct injection, misting and agrodrench. There were plant species-related differences in the response to VIGS because the photobleaching symptoms were more severe in P. × canescens than in P. euphratica. Furthermore, VIGS-treated P. euphratica exhibited a higher recovery rate (50%) after several weeks of the virus infection, compared with TRV-infected P. × canescens plants (20%). Expression stability of reference genes was screened to assess the relative abundance of PePDS mRNA in VIGS-treated P. euphratica and P. × canescens. PeACT7 was stably expressed in P. euphratica and UBQ-L was selected as the most suitable reference gene for P. × canescens using three different statistical approaches, geNorm, NormFinder and BestKeeper. Quantitative real-time PCR showed significant reductions in PDS transcripts (55-64%) in the photobleached leaves of both VIGS-treated poplar species. Our results demonstrate that the TRV-based VIGS provides a practical tool for gene functional analysis in Populus sp., especially in those poplar species which are otherwise recalcitrant to transformation.</div>
</front>
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<DateCompleted>
<Year>2016</Year>
<Month>07</Month>
<Day>04</Day>
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<DateRevised>
<Year>2015</Year>
<Month>09</Month>
<Day>25</Day>
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<Volume>35</Volume>
<Issue>9</Issue>
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<Title>Tree physiology</Title>
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<ArticleTitle>High rates of virus-induced gene silencing by tobacco rattle virus in Populus.</ArticleTitle>
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<AbstractText>Virus-induced gene silencing (VIGS) has been shown to be an effective tool for investigating gene functions in herbaceous plant species, but has rarely been tested in trees. The establishment of a fast and reliable transformation system is especially important for woody plants, many of which are recalcitrant to transformation. In this study, we established a tobacco rattle virus (TRV)-based VIGS system for two Populus species, Populus euphratica and P. × canescens. Here, TRV constructs carrying a 266 bp or a 558 bp fragment of the phytoene desaturase (PDS) gene were Agrobacterium-infiltrated into leaves of the two poplar species. Agrobacterium-mediated delivery of the shorter insert, TRV2-PePDS266, into the host poplars resulted in expected photobleaching in both tree species, but not the longer insert, PePDS558. The efficiency of VIGS was temperature-dependent, increasing by raising the temperature from 18 to 28 °C. The optimized TRV-VIGS system at 28 °C resulted in a high silencing frequency and efficiency up to 65-73 and 83-94%, respectively, in the two tested poplars. Moreover, syringe inoculation of Agrobacterium in 100 mM acetosyringone induced a more efficient silencing in the two poplar species, compared with other agroinfiltration methods, e.g., direct injection, misting and agrodrench. There were plant species-related differences in the response to VIGS because the photobleaching symptoms were more severe in P. × canescens than in P. euphratica. Furthermore, VIGS-treated P. euphratica exhibited a higher recovery rate (50%) after several weeks of the virus infection, compared with TRV-infected P. × canescens plants (20%). Expression stability of reference genes was screened to assess the relative abundance of PePDS mRNA in VIGS-treated P. euphratica and P. × canescens. PeACT7 was stably expressed in P. euphratica and UBQ-L was selected as the most suitable reference gene for P. × canescens using three different statistical approaches, geNorm, NormFinder and BestKeeper. Quantitative real-time PCR showed significant reductions in PDS transcripts (55-64%) in the photobleached leaves of both VIGS-treated poplar species. Our results demonstrate that the TRV-based VIGS provides a practical tool for gene functional analysis in Populus sp., especially in those poplar species which are otherwise recalcitrant to transformation.</AbstractText>
<CopyrightInformation>© The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.</CopyrightInformation>
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<Affiliation>College of Biological Sciences and Technology (Box 162), Beijing Forestry University, Beijing 100083, P.R. China.</Affiliation>
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<Month>07</Month>
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<Country>Canada</Country>
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<Keyword MajorTopicYN="N">Populus euphratica</Keyword>
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<Keyword MajorTopicYN="N">leaf photobleaching</Keyword>
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